RNAJunction Database - Junction Profile:8142
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8142: 1X9K_j2_C-G21_D-G36

Primary Citation: (from PDB entry 1X9K)

S.ALAM V.GRUM-TOKARS J.KRUCINSKA M.L.KUNDRACIK J.E.WEDEKIND CONFORMATIONAL HETEROGENEITY AT POSITION U37 OF AN ALL-RNA HAIRPIN RIBOZYME WITH IMPLICATIONS FOR METAL BINDING AND THE CATALYTIC STRUCTURE OF THE S-TURN. BIOCHEMISTRY V. 44 14396 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2BCY j2 C-G21 D-G36 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 151°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.58105Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: GAGAAACACA 10nt

Strand 2: Chain D: UGGUACAUUACC 12nt

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