RNAJunction Database - Junction Profile:8143
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8143: 1X9K_j2_C-G21_D-U41

Primary Citation: (from PDB entry 1X9K)

S.ALAM V.GRUM-TOKARS J.KRUCINSKA M.L.KUNDRACIK J.E.WEDEKIND CONFORMATIONAL HETEROGENEITY AT POSITION U37 OF AN ALL-RNA HAIRPIN RIBOZYME WITH IMPLICATIONS FOR METAL BINDING AND THE CATALYTIC STRUCTURE OF THE S-TURN. BIOCHEMISTRY V. 44 14396 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2BCY j2 C-G21 D-U41 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 161°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.54352Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: AGAA 4nt

Strand 2: Chain D: AUUAC 5nt

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