RNAJunction Database - Junction Profile:8379
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8379: 1XNR_j2_A-C63_A-C103

Primary Citation: (from PDB entry 1XNR)

F.V.MURPHY V.RAMAKRISHNAN STRUCTURE OF A PURINE-PURINE WOBBLE BASE PAIR IN THE DECODING CENTER OF THE RIBOSOME. NAT.STRUCT.MOL.BIOL. V. 11 1251 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1IBM j2 A-C63 A-C103 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 165°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.63233Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUCGUGCG 8nt

Strand 2: Chain A: AGCGGC 6nt

Valid XHTML 1.0 Transitional