RNAJunction Database - Junction Profile:8419
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8419: 1XNR_j4_A-C1116_A-G1155_A-A1176_A-G1181

Primary Citation: (from PDB entry 1XNR)

F.V.MURPHY V.RAMAKRISHNAN STRUCTURE OF A PURINE-PURINE WOBBLE BASE PAIR IN THE DECODING CENTER OF THE RIBOSOME. NAT.STRUCT.MOL.BIOL. V. 11 1251 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1FJG j4 A-C1116 A-G1155 A-A1176 A-G1181 
NC-IUBMB Classification:Cluster Page
Angles: 22:61:138:144:147:151°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16661Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGGACUGC 8nt

Strand 2: Chain A: CCGCC 5nt

Strand 3: Chain A: GAGG 4nt

Strand 4: Chain A: AGGAGG 6nt

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