RNAJunction Database - Junction Profile:8469
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8469: 1Y69_j2_0-C1829_0-C1885

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1NJO j2 0-C1829 0-C1885 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 160°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.9757Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CCCGGU 6nt

Strand 2: Chain 0: ACGG 4nt

Valid XHTML 1.0 Transitional