RNAJunction Database - Junction Profile:8556

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 8556: 1Y69_j3_0-C2496_0-G2524_0-A2540

Primary Citation: (from PDB entry 1Y69)

D.N.WILSON F.SCHLUENZEN J.M.HARMS T.YOSHIDA T.OHKUBO R.ALBRECHT J.BUERGER Y.KOBAYASHI P.FUCINI X-RAY CRYSTALLOGRAPHY ON RIBOSOME RECYCLING: MECHANISM OF BINDING AND ACTION OF RRF ON THE 50S RIBOSOMAL SUBUNIT EMBO J. V. 24 251 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:2J03 j3 A-C2517 A-G2545 A-A2561 
NC-IUBMB Classification:Cluster Page
Angles: 23:154:169°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.87331Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGGUUGG 7nt

Strand 2: Chain 0: CGCAUCCU 8nt

Strand 3: Chain 0: CCAUUAAAGCG 11nt

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