RNAJunction Database - Junction Profile:936
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 936: 1I94_j4_A-G108_A-U234_A-A269_A-C306

Primary Citation: (from PDB entry 1I94)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1HNW j4 A-G115 A-U239 A-A274 A-C311 
NC-IUBMB Classification:Cluster Page
Angles: 16:67:74:100:108:173°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76906Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCCAUCAGCUAGUUG 18nt

Strand 2: Chain A: GUGAGUAACGCG 12nt

Strand 3: Chain A: CAAGGCGACGACGGGUAGCC 20nt

Strand 4: Chain A: GGCCAC 6nt

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