RNAJunction Database - Junction Profile:9450
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9450: 1YL4_j2_A-A675_A-G713

Primary Citation: (from PDB entry 1YL4)

L.JENNER P.ROMBY B.REES C.SCHULZE-BRIESE M.SPRINGER C.EHRESMANN B.EHRESMANN D.MORAS G.YUSUPOVA M.YUSUPOV TRANSLATIONAL OPERATOR OF MRNA ON THE RIBOSOME: HOW REPRESSOR PROTEINS EXCLUDE RIBOSOME BINDING SCIENCE V. 308 120 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VOV j2 A-G674 A-A712 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 163°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16363Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGAAUUC 7nt

Strand 2: Chain A: GAGGAAC 7nt

Valid XHTML 1.0 Transitional