RNAJunction Database - Junction Profile:9503
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9503: 1YTY_j2_C-C3_D-C3

Primary Citation: (from PDB entry 1YTY)

M.TEPLOVA Y.R.YUAN S.ILIN L.MALININA A.T.PHAN A.TEPLOV D.J.PATEL STRUCTURAL BASIS FOR RECOGNITION AND SEQUESTRATION OF UUU(OH) 3' TEMINI OF NASCENT RNA POLYMERASE III TRANSCRIPTS BY LA, A RHEUMATIC DISEASE AUTOANTIGEN. MOL.CELL V. 21 75 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1ZH5 j2 C-C3 D-C3 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 175°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.6013Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: GCUGU 5nt

Strand 2: Chain D: GCUGU 5nt

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