RNAJunction Database - Junction Profile:9640
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9640: 1ZFT_j2_C-G21_D-U41

Primary Citation: (from PDB entry 1ZFT)

J.E.WEDEKIND WATER IN THE ACTIVE SITE OF AN ALL-RNA HAIRPIN RIBOZYME AND EFFECTS OF GUA8 BASE VARIANTS ON THE GEOMETRY OF PHOSPHORYL TRANSFER. BIOCHEMISTRY V. 45 686 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2BCY j2 C-G21 D-U41 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 156°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.37639Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: AGAA 4nt

Strand 2: Chain D: AUUAC 5nt

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