RNAJunction Database - Junction Profile:9810
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9810: 2AAR_j5_0-C593_0-A681_0-G822_0-G1209_0-G1263

Primary Citation: (from PDB entry 2AAR)

D.BARAM E.PYETAN A.SITTNER T.AUERBACH-NEVO A.BASHAN A.YONATH STRUCTURE OF TRIGGER FACTOR BINDING DOMAIN IN BIOLOGICALLY HOMOLOGOUS COMPLEX WITH EUBACTERIAL RIBOSOME REVEALS ITS CHAPERONE ACTION PROC.NATL.ACAD.SCI.USA V. 102 12017 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1JZZ j5 A-C593 A-A681 A-G822 A-G1209 A-G1263 
NC-IUBMB Classification:Cluster Page
Angles: 61:69:83:90:98:109:113:115:156:159°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.10321Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UAGACU 6nt

Strand 2: Chain 0: GCGACUUA 8nt

Strand 3: Chain 0: AGUUCU 6nt

Strand 4: Chain 0: AGCG 4nt

Strand 5: Chain 0: UGCGGAUGC 9nt

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