RNAJunction Database - Junction Profile:9853
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9853: 2AVY_j2_A-G259_A-G265

Primary Citation: (from PDB entry 2AVY)

B.S.SCHUWIRTH M.A.BOROVINSKAYA C.W.HAU W.ZHANG A.VILA- SANJURJO J.M.HOLTON J.H.D.CATE STRUCTURES OF THE BACTERIAL RIBOSOME AT 3.5 A RESOLUTION SCIENCE V. 310 827 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2I2U j2 A-G259 A-G265 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 155°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.76587Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGGCU 5nt

Strand 2: Chain A: GGGU 4nt

Valid XHTML 1.0 Transitional