RNAJunction Database - Junction Profile:9892
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 9892: 2AVY_j4_A-G22_A-C556_A-C883_A-C912

Primary Citation: (from PDB entry 2AVY)

B.S.SCHUWIRTH M.A.BOROVINSKAYA C.W.HAU W.ZHANG A.VILA- SANJURJO J.M.HOLTON J.H.D.CATE STRUCTURES OF THE BACTERIAL RIBOSOME AT 3.5 A RESOLUTION SCIENCE V. 310 827 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1VS5 j4 A-G22 A-C556 A-C883 A-C912 
NC-IUBMB Classification:Cluster Page
Angles: 48:62:68:140:144:152°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.64693Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUCGGAAUUACUGGGC 16nt

Strand 2: Chain A: UGGCUCAGAU 10nt

Strand 3: Chain A: GCCUGGG 7nt

Strand 4: Chain A: CUCAAA 6nt

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