RNAJunction Database - Junction Profile:1016
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1016: 1I95_j5_A-C58_A-C96_A-A310_A-C332_A-G346

Primary Citation: (from PDB entry 1I95)

M.PIOLETTI F.SCHLUENZEN J.HARMS R.ZARIVACH M.GLUEHMANN H.AVILA H.BARTELS C.JACOBI T.HARTSCH A.YONATH F.FRANCESCHI CRYSTAL STRUCTURES OF COMPLEXES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3 EMBO J. V. 20 1829 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1I95 j5 A-C58 A-C96 A-A310 A-C332 A-G346 
NC-IUBMB Classification:Cluster Page
Angles: 38:66:72:82:104:109:120:125:138:169°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.89557Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AGCGGCGGACGGGU 14nt

Strand 2: Chain A: UGCAAGUCGUGCG 13nt

Strand 3: Chain A: ACAGGG 6nt

Strand 4: Chain A: CCCACU 6nt

Strand 5: Chain A: AGGCAGCA 8nt

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