RNAJunction Database - Junction Profile:10277

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10277: 2B9O_j2_A-G447_A-U480

Primary Citation: (from PDB entry 2B9O)

S.PETRY D.E.BRODERSEN F.V.MURPHY IV C.M.DUNHAM M.SELMER M.J.TARRY A.C.KELLEY V.RAMAKRISHNAN CRYSTAL STRUCTURES OF THE RIBOSOME IN COMPLEX WITH RELEASE FACTORS RF1 AND RF2 BOUND TO A COGNATE STOP CODON. CELL (CAMBRIDGE,MASS.) V. 123 1255 2005

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2B9O j2 A-G447 A-U480 
NC-IUBMB Classification:HS4HS6Cluster Page
Angles: 140°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.16233Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACUGACGGUACC 12nt

Strand 2: Chain A: GGGACGAAAC 10nt

Valid XHTML 1.0 Transitional