RNAJunction Database - Junction Profile:10388
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10388: 2CKY_j2_A-U47_A-G64

Primary Citation: (from PDB entry 2CKY)

S.THORE M.LEIBUNDGUT N.BAN STRUCTURE OF THE EUKARYOTIC THIAMINE PYROPHOSPHATE RIBOSWITCH WITH ITS REGULATORY LIGAND. SCIENCE V. 312 1208 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2CKY j2 A-U47 A-G64 
NC-IUBMB Classification:HS3HS3Cluster Page
Angles: 155°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.73248Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CCUGAACAG 9nt

Strand 2: Chain A: CUGCGCAGG 9nt

Valid XHTML 1.0 Transitional