RNAJunction Database - Junction Profile:10595
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10595: 2F88_j2_A-G8_A-C23

Primary Citation: (from PDB entry 2F88)

K.T.DAYIE STRUCTURE OF A SELF-SPLICING GROUP II INTRON CATALYTIC EFFECTOR DOMAIN 5: PARALLELS WITH SPLICEOSOMAL U6 RNA RNA V. 12 235 2006

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2F88 j2 A-G8 A-C23 
NC-IUBMB Classification:HS1HS3Cluster Page
Angles: 140°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.45699Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGCAAGCAC 9nt

Strand 2: Chain A: GUGUGCG 7nt

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