RNAJunction Database - Junction Profile:10596
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10596: 2F8S_j2_C-U11_D-A8

Primary Citation: (from PDB entry 2F8S)

Y.R.YUAN H.Y.CHEN D.J.PATEL A POTENTIAL PROTEIN-RNA RECOGNITION EVENT ALONG THE RISC-LOADING PATHWAY FROM THE STRUCTURE OF A. AEOLICUS ARGONAUTE WITH EXTERNALLY BOUND SIRNA. STRUCTURE V. 14 1557 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2F8S j2 C-U11 D-A8 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 167°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.67352Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: UAUAUGC 7nt

Strand 2: Chain D: GCAUAUA 7nt

Valid XHTML 1.0 Transitional