RNAJunction Database - Junction Profile:10612
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10612: 2G5K_j2_A-C9_B-A38

Primary Citation: (from PDB entry 2G5K)

J.KONDO B.FRANCOIS A.URZHUMTSEV E.WESTHOF CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH APRAMYCIN ANGEW.CHEM.INT.ED.ENGL. V. 45 3310 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:2G5K j2 A-C9 B-A38 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 167°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.59327Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGCUCC 6nt

Strand 2: Chain B: GGAAAAG 7nt

Valid XHTML 1.0 Transitional