RNAJunction Database - Junction Profile:10824
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10824: 2GYA_j5_0-A2054_0-G2446_0-C2496_0-U2580_0-C2606

Primary Citation: (from PDB entry 2GYA)

K.MITRA J.FRANK ELONGATION ARREST BY SECM VIA A CASCADE OF RIBOSOMAL RNA REARRANGEMENTS MOL.CELL V. 22 533 2006

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:2GYA j5 0-A2054 0-G2446 0-C2496 0-U2580 0-C2606 
NC-IUBMB Classification:Cluster Page
Angles: 22:28:30:39:114:133:134:152:154:165°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.56111Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GGGGAUAACAGGCU 14nt

Strand 2: Chain 0: AGACGGAAAGACCCC 15nt

Strand 3: Chain 0: GGCACCUCGAUGUCGGC 17nt

Strand 4: Chain 0: GCUGGGUUUAGAA 13nt

Strand 5: Chain 0: UUCGGUCCCUAUCU 14nt

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