RNAJunction Database - Junction Profile:10828
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 10828: 2GYA_j5_0-G1667_0-C1706_0-U1751_0-G1756_0-G1988

Primary Citation: (from PDB entry 2GYA)

K.MITRA J.FRANK ELONGATION ARREST BY SECM VIA A CASCADE OF RIBOSOMAL RNA REARRANGEMENTS MOL.CELL V. 22 533 2006

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:5-wayCluster:2GYA j5 0-G1667 0-C1706 0-U1751 0-G1756 0-G1988 
NC-IUBMB Classification:Cluster Page
Angles: 22:33:51:64:121:140:144:147:154:164°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.03642Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: ACGC 4nt

Strand 2: Chain 0: GGAACUAGGCAAAAUGGU 18nt

Strand 3: Chain 0: GUCG 4nt

Strand 4: Chain 0: AGAUACCAGCU 11nt

Strand 5: Chain 0: AGGCUGUCU 9nt

Valid XHTML 1.0 Transitional