RNAJunction Database - Junction Profile:11420
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 11420: 2HHH_j2_A-A1221_A-C1278

Primary Citation: (from PDB entry 2HHH)

F.SCHLUENZEN THE ANTIBIOTIC KASUGAMYCIN MIMICS MRNA NUCLEOTIDES TO DESTABILIZE TRNA BINDING AND INHIBIT CANONICAL TRANSLATION INITIATION. NAT.STRUCT.MOL.BIOL. V. 13 871 2006

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2HHH j2 A-A1221 A-C1278 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 67°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.44755Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCCCAG 6nt

Strand 2: Chain A: AAUGC 5nt

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