RNAJunction Database - Junction Profile:1179
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1179: 1IBK_j2_A-A411_A-G428

Primary Citation: (from PDB entry 1IBK)

J.M.OGLE D.E.BRODERSEN W.M.CLEMONS JR. M.J.TARRY A.P.CARTER V.RAMAKRISHNAN RECOGNITION OF COGNATE TRANSFER RNA BY THE 30S RIBOSOMAL SUBUNIT SCIENCE V. 292 897 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1IBK j2 A-A411 A-G428 
NC-IUBMB Classification:HS2HS3Cluster Page
Angles: 124°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.73845Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGAAGAAGC 9nt

Strand 2: Chain A: GUGUAAAC 8nt

Valid XHTML 1.0 Transitional