RNAJunction Database - Junction Profile:12212
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12212: 2NOK_j2_A-C65_B-G100

Primary Citation: (from PDB entry 2NOK)

S.M.DIBROV H.JOHNSTON-COS Y.H.WENG FUNCTIONAL ARCHITECTURE OF HCV IRES DOMAIN II STABILIZED BY DIVALENT METAL IONS IN THE CRYSTAL AND IN SOLUTION. ANGEW.CHEM.INT.ED.ENGL. V. 46 226 2007

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:2NOK j2 A-C65 B-G100 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 163°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.09899Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UUCACGC 7nt

Strand 2: Chain B: GCGUGUC 7nt

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