RNAJunction Database - Junction Profile:12856
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12856: 437D_j2_A-G12_A-A23

Primary Citation: (from PDB entry 437D)

L.SU L.CHEN M.EGLI J.M.BERGER A.RICH A MINOR GROOVE RNA TRIPLEX IN THE CRYSTAL STRUCTURE OF A VIRAL PSEUDOKNOT INVOLVED IN RIBOSOMAL FRAMESHIFTING NAT.STRUCT.BIOL. V. 6 1999

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:437D j2 A-G12 A-A23 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 159°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.03034Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGUCCG 6nt

Strand 2: Chain A: CAAACG 6nt

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