RNAJunction Database - Junction Profile:12859
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 12859: 484D_j2_B-U7_B-C20

Primary Citation: (from PDB entry 484D)

X.YE A.A.GORIN R.FREDERICK W.HU A.MAJUMDAR W.XU G.MCLENDON A.ELLINGTON D.J.PATEL RNA ARCHITECTURE DICTATES THE CONFORMATIONS OF A BOUND PEPTIDE CHEM.BIOL. V. 6 657 1999

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:484D j2 B-U7 B-C20 
NC-IUBMB Classification:2HS2Cluster Page
Angles: 149°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.87048Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain B: UCUUGGAG 8nt

Strand 2: Chain B: AUCGGA 6nt

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