RNAJunction Database - Junction Profile:1461
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1461: 1J5E_j2_A-C242_A-G278

Primary Citation: (from PDB entry 1J5E)

B.T.WIMBERLY D.E.BRODERSEN W.M.CLEMONS JR. R.MORGAN-WARREN A.P.CARTER C.VONRHEIN T.HARTSCH V.RAMAKRISHNAN STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT NATURE V. 407 327 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1FJG j2 A-C242 A-G278 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 63°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.81686Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGACGACGGG 11nt

Strand 2: Chain A: CCCAUCAGC 9nt

Valid XHTML 1.0 Transitional