RNAJunction Database - Junction Profile:155
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 155: 1CSL_j2_A-G47_B-G67

Primary Citation: (from PDB entry 1CSL)

J.A.IPPOLITO T.A.STEITZ THE STRUCTURE OF THE HIV-1 RRE HIGH AFFINITY REV BINDING SITE AT 1.6 A RESOLUTION J.MOL.BIOL. V. 295 711 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1CSL j2 A-G47 B-G67 
NC-IUBMB Classification:HS3HS5Cluster Page
Angles: 165°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.41515Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGGGCGCAG 9nt

Strand 2: Chain B: CUGACGGUACG 11nt

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