RNAJunction Database - Junction Profile:1638
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1638: 1JO7_j2_A-C9_A-C21

Primary Citation: (from PDB entry 1JO7)

S.-H.BAE H.-K.CHEONG J.-H.LEE C.CHEONG M.KAINOSHO B.-S.CHOI STRUCTURAL FEATURES OF AN INFLUENZA VIRUS PROMOTER AND THEIR IMPLICATIONS FOR VIRAL RNA SYNTHESIS PROC.NAT.ACAD.SCI.USA V. 98 10602 2001

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1JO7 j2 A-C9 A-C21 
NC-IUBMB Classification:HS2HS2Cluster Page
Angles: 171°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.30186Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: ACAAGG 6nt

Strand 2: Chain A: CCUGCU 6nt

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