RNAJunction Database - Junction Profile:1642
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 1642: 1JZV_j2_A-G4_B-U12

Primary Citation: (from PDB entry 1JZV)

Y.XIONG C.SUDARSANAKUMAR J.DENG B.PAN M.SUNDARALINGAM CRYSTAL STRUCTURE OF A BULGED RNA FROM THE SL2 STEM-LOOP OF THE HIV-1 PSI-RNA

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1JZV j2 A-G4 B-U12 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 164°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.58211Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CGAC 4nt

Strand 2: Chain B: GUACG 5nt

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