RNAJunction Database - Junction Profile:2033

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2033: 1K01_j3_A-C2788_A-G2806_A-U2853

Primary Citation: (from PDB entry 1K01)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1K01 j3 A-C2788 A-G2806 A-U2853 
NC-IUBMB Classification:Cluster Page
Angles: 39:131:165°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.74843Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGGUUAAGAGGCC 13nt

Strand 2: Chain A: GACUCCC 7nt

Strand 3: Chain A: GGUGCUCAUCAGUC 14nt

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