RNAJunction Database - Junction Profile:2294
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2294: 1K8S_j2_A-G5_B-C20

Primary Citation: (from PDB entry 1K8S)

V.THIVIYANATHAN A.B.GULIAEV N.B.LEONTIS D.G.GORENSTEIN SOLUTION CONFORMATION OF A BULGED ADENOSINE BASE IN AN RNA DUPLEX BY RELAXATION MATRIX REFINEMENT J.MOL.BIOL. V. 300 1143 2000

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1K8S j2 A-G5 B-C20 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 151°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.58401Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAGAGUG 7nt

Strand 2: Chain B: CACCUG 6nt

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