RNAJunction Database - Junction Profile:2776
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2776: 1L1C_j2_C-A3_C-A25

Primary Citation: (from PDB entry 1L1C)

Y.YANG N.DECLERCK X.MANIVAL S.AYMERICH M.KOCHOYAN SOLUTION STRUCTURE OF THE LICT-RNA ANTITERMINATION COMPLEX: CAT CLAMPING RAT EMBO J. V. 21 1987 2002

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1L1C j2 C-A3 C-A25 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 170°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.94294Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain C: CAAAACC 7nt

Strand 2: Chain C: GGAUUG 6nt

Valid XHTML 1.0 Transitional