RNAJunction Database - Junction Profile:2954

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2954: 1M82_j2_A-C6_A-C17

Primary Citation: (from PDB entry 1M82)

C.-J.PARK S.-H.BAE M.-K.LEE G.VARANI B.-S.CHOI SOLUTION STRUCTURE OF THE INFLUENZA A VIRUS CRNA PROMOTER: IMPLICATIONS FOR DIFFERENTIAL RECOGNITION OF VIRAL PROMOTER STRUCTURES BY RNA-DEPENDENT RNA POLYMERASE NUCLEIC ACIDS RES. V. 31 2824 2003

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1M82 j2 A-C6 A-C17 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 161°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.01242Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCCUUGUU 8nt

Strand 2: Chain A: AGCAGGC 7nt

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