RNAJunction Database - Junction Profile:3069
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3069: 1MFK_j2_A-U6_A-C17

Primary Citation: (from PDB entry 1MFK)

D.FOURMY E.GUITTET S.YOSHIZAWA STRUCTURE OF PROKARYOTIC SECIS MRNA HAIRPIN AND ITS INTERACTION WITH ELONGATION FACTOR SELB J.MOL.BIOL. V. 324 137 2002

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1MFK j2 A-U6 A-C17 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 173°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.85978Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUUGCA 7nt

Strand 2: Chain A: UGCACC 6nt

Valid XHTML 1.0 Transitional