RNAJunction Database - Junction Profile:3073
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3073: 1MFY_j2_A-A7_A-C21

Primary Citation: (from PDB entry 1MFY)

M.-K.LEE S.-H.BAE C.-J.PARK H.-K.CHEONG C.CHEONG B.-S.CHOI A SINGLE-NUCLEOTIDE NATURAL VARIATION (U4 TO C4) IN AN INFLUENZA A VIRUS PROMOTER EXHIBITS A LARGE STRUCTURAL CHANGE: IMPLICATIONS FOR DIFFERENTIAL VIRAL RNA SYNTHESIS BY RNA-DEPENDENT RNA POLYMERASE. NUCLEIC ACIDS RES. V. 31 1216 2003

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1MFY j2 A-A7 A-C21 
NC-IUBMB Classification:HS4HS4Cluster Page
Angles: 167°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.862Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAAACAAGGC 10nt

Strand 2: Chain A: GCCUGCUUUC 10nt

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