RNAJunction Database - Junction Profile:319
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 319: 1FFK_j5_0-A2095_0-G2481_0-U2531_0-U2615_0-C2641

Primary Citation: (from PDB entry 1FFK)

N.BAN P.NISSEN J.HANSEN P.B.MOORE T.A.STEITZ THE COMPLETE ATOMIC STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT AT 2.4 A RESOLUTION SCIENCE V. 289 905 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1Q82 j5 A-A2095 A-G2481 A-U2531 A-U2615 A-C2641 
NC-IUBMB Classification:Cluster Page
Angles: 20:28:30:46:109:128:131:151:156:172°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.92147Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGGAUAACAGAGU 14nt

Strand 2: Chain 0: GGAAGCGAAGACCCU 15nt

Strand 3: Chain 0: GCUACCUCGAUGUCGGU 17nt

Strand 4: Chain 0: GCUGGGUUUAGAC 13nt

Strand 5: Chain 0: GUCGGCUGCUAUCU 14nt

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