RNAJunction Database - Junction Profile:320
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 320: 1FFK_j5_0-A912_0-G1071_0-A1086_0-C1267_0-G1290

Primary Citation: (from PDB entry 1FFK)

N.BAN P.NISSEN J.HANSEN P.B.MOORE T.A.STEITZ THE COMPLETE ATOMIC STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT AT 2.4 A RESOLUTION SCIENCE V. 289 905 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1FFK j5 0-A912 0-G1071 0-A1086 0-C1267 0-G1290 
NC-IUBMB Classification:Cluster Page
Angles: 31:47:53:67:103:124:128:135:151:177°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.90817Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: AGGAG 5nt

Strand 2: Chain 0: GAAA 4nt

Strand 3: Chain 0: CAGAGA 6nt

Strand 4: Chain 0: UCCG 4nt

Strand 5: Chain 0: CGAGUA 6nt

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