RNAJunction Database - Junction Profile:4039
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4039: 1NJO_j5_0-C46_0-G115_0-C128_0-U142_0-A153

Primary Citation: (from PDB entry 1NJO)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:5-wayCluster:1NJP j5 0-C46 0-G115 0-C128 0-U142 0-A153 
NC-IUBMB Classification:Cluster Page
Angles: 30:73:82:83:98:106:121:151:156:170°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.18995Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CGAAUGG 7nt

Strand 2: Chain 0: CCGAUGAAG 9nt

Strand 3: Chain 0: CCAC 4nt

Strand 4: Chain 0: GUAUC 5nt

Strand 5: Chain 0: GAUGG 5nt

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