RNAJunction Database - Junction Profile:4242
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4242: 1O15_j2_A-C9_A-C20

Primary Citation: (from PDB entry 1O15)

G.M.CLORE J.KUSZEWSKI IMPROVING THE ACCURACY OF NMR STRUCTURES OF RNA BY MEANS OF CONFORMATIONAL DATABASE POTENTIALS OF MEAN FORCE AS ASSESSED BY COMPLETE DIPOLAR COUPLING CROSS-VALIDATION J.AM.CHEM.SOC. V. 125 1518 2003

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1O15 j2 A-C9 A-C20 
NC-IUBMB Classification:HS1HS4Cluster Page
Angles: 169°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.08979Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCCCUUGG 8nt

Strand 2: Chain A: CCAGC 5nt

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