RNAJunction Database - Junction Profile:4295
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4295: 1OOA_j2_D-U6_D-G22

Primary Citation: (from PDB entry 1OOA)

D.B.HUANG D.VU L.A.CASSIDAY J.M.ZIMMERMAN L.J.MAHER III G.GHOSH CRYSTAL STRUCTURE OF NF-KAPPAB (P50)2 COMPLEXED TO A HIGH-AFFINITY RNA APTAMER. PROC.NATL.ACAD.SCI.USA V. 100 9268 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1OOA j2 D-U6 D-G22 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 87°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.37587Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain D: ACUUGAAA 8nt

Strand 2: Chain D: UUGGCGU 7nt

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