RNAJunction Database - Junction Profile:4297

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4297: 1OW9_j2_A-G5_A-G18

Primary Citation: (from PDB entry 1OW9)

B.HOFFMANN G.T.MITCHELL P.GENDRON F.MAJOR A.A.ANDERSEN R.A.COLLINS P.LEGAULT NMR STRUCTURE OF THE ACTIVE CONFORMATION OF THE VARKUD SATELLITE RIBOZYME CLEAVAGE SITE PROC.NAT.ACAD.SCI.USA V. 100 7003 2003

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1OW9 j2 A-G5 A-G18 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 159°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.13174Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GCGAAGA 7nt

Strand 2: Chain A: UCGAGC 6nt

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