RNAJunction Database - Junction Profile:4649
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 4649: 1PNY_j2_0-A80_0-A101

Primary Citation: (from PDB entry 1PNY)

A.VILA-SANJURJO W.K.RIDGEWAY V.SEYMANER W.ZHANG S.SANTOSO K.YU J.H.D.CATE X-RAY CRYSTAL STRUCTURES OF THE WT AND A HYPER-ACCURATE RIBOSOME FROM ESCHERICHIA COLI PROC.NAT.ACAD.SCI.USA V. 100 8682 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1PNY j2 0-A80 0-A101 
NC-IUBMB Classification:HS1HS1Cluster Page
Angles: 162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.32369Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: GACGA 5nt

Strand 2: Chain 0: GACUC 5nt

Valid XHTML 1.0 Transitional