RNAJunction Database - Junction Profile:5457
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5457: 1QWA_j2_A-C6_A-G14

Primary Citation: (from PDB entry 1QWA)

L.D.FINGER L.TRANTIREK C.JOHANSSON J.FEIGON SOLUTION STRUCUTRES OF STEM-LOOP RNAS THAT BIND TO THE TWO N-TERMINAL RNA BINDING DOMAINS OF NUCLEOLIN NUCLEIC ACIDS RES. V. 31 6461 2003

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1QWA j2 A-C6 A-G14 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 142°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.31287Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GAGUGCA 7nt

Strand 2: Chain A: UGCCUC 6nt

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