RNAJunction Database - Junction Profile:5488
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5488: 1RY1_j2_Q-U103_R-U248

Primary Citation: (from PDB entry 1RY1)

M.HALIC T.BECKER M.R.POOL C.M.SPAHN R.A.GRASSUCCI J.FRANK R.BECKMANN MAINTAINS THAT SOME STRUCTURE OF THE SIGNAL RECOGNITION PARTICLE INTERACTING WITH THE ELONGATION-ARRESTED RIBOSOME NATURE V. 427 808 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1RY1 j2 Q-U103 R-U248 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 163°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.12392Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain Q: AUCGG 5nt

Strand 2: Chain R: CUGU 4nt

Valid XHTML 1.0 Transitional