RNAJunction Database - Junction Profile:5810
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5810: 1SM1_j2_0-G1220_0-G1249

Primary Citation: (from PDB entry 1SM1)

J.M.HARMS F.SCHLUENZEN P.FUCINI H.BARTELS A.YONATH ALTERATIONS AT THE PEPTIDYL TRANSFERASE CENTRE OF THE RIBOSOME INDUCED BY THE SYNERGISTIC ACTION OF THE STREPTOGRAMINS DALFOPRISTIN AND QUINUPRISTIN. BMC BIOL. V. 2 4 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1SM1 j2 0-G1220 0-G1249 
NC-IUBMB Classification:HS2HS5Cluster Page
Angles: 30°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.19111Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CCGCGGAGAAG 11nt

Strand 2: Chain 0: UGGAGCCG 8nt

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