RNAJunction Database - Junction Profile:5817
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5817: 1SM1_j2_0-G215_0-A232

Primary Citation: (from PDB entry 1SM1)

J.M.HARMS F.SCHLUENZEN P.FUCINI H.BARTELS A.YONATH ALTERATIONS AT THE PEPTIDYL TRANSFERASE CENTRE OF THE RIBOSOME INDUCED BY THE SYNERGISTIC ACTION OF THE STREPTOGRAMINS DALFOPRISTIN AND QUINUPRISTIN. BMC BIOL. V. 2 4 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1OND j2 0-G215 0-A232 
NC-IUBMB Classification:HS3HS4Cluster Page
Angles: 139°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.81246Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CCGUUAGUAG 10nt

Strand 2: Chain 0: CGAACCCGG 9nt

Valid XHTML 1.0 Transitional