RNAJunction Database - Junction Profile:5840
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5840: 1T0E_j2_A-G7_C-C16

Primary Citation: (from PDB entry 1T0E)

S.SHANDRICK Q.ZHAO Q.HAN B.K.AYIDA M.TAKAHASHI G.C.WINTERS K.B.SIMONSEN D.VOURLOUMIS T.HERMANN MONITORING MOLECULAR RECOGNITION OF THE RIBOSOMAL DECODING SITE ANGEW.CHEM.INT.ED.ENG. V. 43 3177 2004

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1J7T j2 A-C6 B-G37 
NC-IUBMB Classification:HS1HS2Cluster Page
Angles: 177°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.54365Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GUGAAGUC 8nt

Strand 2: Chain C: GUCACAC 7nt

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