RNAJunction Database - Junction Profile:698

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 698: 1HNX_j4_A-U955_A-U960_A-G973_A-G1221

Primary Citation: (from PDB entry 1HNX)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:1HNX j4 A-U955 A-U960 A-G973 A-G1221 
NC-IUBMB Classification:Cluster Page
Angles: 57:88:90:102:128:176°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.84995Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AUUCG 5nt

Strand 2: Chain A: GUUU 4nt

Strand 3: Chain A: CGAAGAACCUUACC 14nt

Strand 4: Chain A: GGGCGAC 7nt

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