RNAJunction Database - Junction Profile:7
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 7: 1ANR_j2_A-G21_A-C39

Primary Citation: (from PDB entry 1ANR)

F.ABOUL-ELA G.VARANI J.KARN STRUCTURE OF HIV-1 TAR RNA IN THE ABSENCE OF LIGANDS REVEALS A NOVEL CONFIGURATION OF THE TRINUCLEOTIDE BULGE

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1ANR j2 A-G21 A-C39 
NC-IUBMB Classification:HS1HS4Cluster Page
Angles: 113°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.17722Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: CAGAUCUGAG 10nt

Strand 2: Chain A: CUCUCUG 7nt

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